2/16/2024 0 Comments For windows instal Return to Abyss![]() ![]() apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/5.4.0/include/omp.h:86:28: error: 'omp_lock_t' was not declared in this scope apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/5.4.0/include/omp.h:86:28: error: variable or field 'omp_init_lock' declared voidĮxtern void omp_init_lock (omp_lock_t *) _GOMP_NOTHROW apps/gentoo/usr/lib/gcc/x86_64-pc-linux-gnu/5.4.0/include/omp.h:39:3: error: 'omp_lock_t' does not name a type 2.1.0 -isystem/apps/gentoo/var/tmp/portage/sci-biology/abyss-2.1.0/work/abyss-2.1.0/boost_1_56_0 -Wl,-as-needed conftest.cpp -ldl -lm >&5Ĭonftest.cpp:78:2: error: 'choke' does not name a type If you do not wish to use sparsehash, specify -without-sparsehash.Ĭonfigure:8241: checking for x86_64-pc-linux-gnu-g++ option to support OpenMPĬonfigure:8256: x86_64-pc-linux-gnu-g++ -o conftest -O2 -pipe -O2 -pipe -march=native -ftree-vectorize -I/apps/gentoo/var/tmp/portage/sci-biology/abyss-2.1.0/work/abyss fopenmpĬonfigure: error: ABySS should be compiled with Google sparsehash to yesĬhecking for x86_64-pc-linux-gnu-g++ option to support OpenMP. ![]() ![]() yesĬhecking boost/unordered_set.hpp presence. yesĬhecking boost/unordered_set.hpp usability. yesĬonfigure: WARNING: google/sparse_hash_map: present but cannot be compiledĬonfigure: WARNING: google/sparse_hash_map: check for missing prerequisite headers?Ĭonfigure: WARNING: google/sparse_hash_map: see the Autoconf documentationĬonfigure: WARNING: google/sparse_hash_map: section "Present But Cannot Be Compiled"Ĭonfigure: WARNING: google/sparse_hash_map: proceeding with the compiler's resultĬonfigure: WARNING: # - #Ĭonfigure: WARNING: # Report this to #Ĭhecking for google/sparse_hash_map. noĬhecking google/sparse_hash_map presence. yesĬhecking google/sparse_hash_map usability. yesĬhecking for boost/property_map/property_map.hpp. yesĬhecking boost/property_map/property_map.hpp presence. yesĬhecking boost/property_map/property_map.hpp usability. yesĬhecking for boost/functional/hash.hpp. yesĬhecking boost/functional/hash.hpp presence. Checking boost/functional/hash.hpp usability. ![]()
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